J3_9Q2M_036

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UG*UGUC*GAUAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|U|1366
9Q2M|1|9|G|1367
*
9Q2M|1|9|U|1376
9Q2M|1|9|G|1377
9Q2M|1|9|U|1378
9Q2M|1|9|C|1379
*
9Q2M|1|9|G|1391
9Q2M|1|9|A|1392
9Q2M|1|9|U|1393
9Q2M|1|9|A|1394
9Q2M|1|9|A|1395

Current chains

Chain 9

18S rRNA

Nearby chains

Chain AA

40S_SA_C domain-containing protein

Chain CC

40S ribosomal protein S2

Chain RR

40S ribosomal protein S17