J3_9Q2P_001

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

9Q2P|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|5|C|112
9Q2P|1|5|A|113
9Q2P|1|5|G|114
9Q2P|1|5|C|115
9Q2P|1|5|G|116
*
9Q2P|1|5|C|155
9Q2P|1|5|G|156
9Q2P|1|5|U|157
9Q2P|1|5|A|158
9Q2P|1|5|C|159
9Q2P|1|5|G|160
*
9Q2P|1|5|C|275
9Q2P|1|5|C|276
9Q2P|1|5|G|277
9Q2P|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

Large ribosomal subunit protein eL8

Chain L

Large ribosomal subunit protein eL13

Chain N

60S ribosomal protein L15

Chain h

60S ribosomal protein L35

Chain i

60S ribosomal protein L36