J3_9Q2P_020
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 9Q2P|1|5|A|4280, 9Q2P|1|5|A|4282
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2P|1|5|C|4241
9Q2P|1|5|U|4242
9Q2P|1|5|C|4243
*
9Q2P|1|5|G|4267
9Q2P|1|5|A|4268
9Q2P|1|5|G|4269
*
9Q2P|1|5|C|4278
9Q2P|1|5|A|4279
9Q2P|1|5|A|4280
9Q2P|1|5|A|4281
9Q2P|1|5|A|4282
9Q2P|1|5|G|4283
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain J
- 60S ribosomal protein L11
- Chain T
- 60S ribosomal protein L21
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