J3_9Q2T_033
3D structure
- PDB id
- 9Q2T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 9Q2T|1|9|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2T|1|9|A|938
9Q2T|1|9|U|939
9Q2T|1|9|U|940
9Q2T|1|9|C|941
*
9Q2T|1|9|G|985
9Q2T|1|9|G|986
9Q2T|1|9|A|987
9Q2T|1|9|C|988
9Q2T|1|9|C|989
9Q2T|1|9|A|990
9Q2T|1|9|G|991
9Q2T|1|9|A|992
9Q2T|1|9|G|993
*
9Q2T|1|9|C|1000
9Q2T|1|9|A|1001
9Q2T|1|9|U|1002
9Q2T|1|9|U|1003
9Q2T|1|9|U|1004
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain BB
- 40S ribosomal protein S3a
- Chain NN
- 40S ribosomal protein S13
- Chain OO
- Small ribosomal subunit protein uS11
- Chain aa
- eS26
- Chain p
- 60S ribosomal protein L37a
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