#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 7 8 9 10 11 12break 13 14 15 16 171-172-163-154-510-1412-13
1 J3_8GLP_0448GLP0.16591S2 SSU rRNAA938U939U940C941*G985G986A987C988C989A990A992G993*C1000A1001U1002U1003PSU1004cWWcwWncwWcWWtWWcWW
2 J3_9H3G_0339H3G0.00001h1 SSU rRNAA882U883U884C885*G929A930A931C932A933A934U936G937*C944A945U946U947PSU948cWWcwWncwWcWWtWWcWW
3 J3_8P9A_0748P9A0.08271sR SSU rRNAA881U882C883A884*U928A929A930C931U932A933U935G936*C943A944U945U946U947cWWcwWcWWcWWtWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AUUC*GGACCAGAG*CAUUPSU1
AUUC*GAACAACUG*CAUUPSU1
AUCA*UAACUACUG*CAUUU1
Non-Watson-Crick part of the motif
SequenceCounts
UU*GACCAGA*AUU1
UU*AACAACU*AUU1
UC*AACUACU*AUU1

Release history

Release4.7
Date2026-02-25
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
    Heat map statistics
    Min 0.08 | Avg 0.09 | Max 0.17
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