J3_9Q6T_012
3D structure
- PDB id
- 9Q6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- GCGGGAC*GGCAG*CC
- Length
- 14 nucleotides
- Bulged bases
- 9Q6T|1|1A|A|1384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q6T_012 not in the Motif Atlas
- Homologous match to J3_7A0S_018
- Geometric discrepancy: 0.1687
- The information below is about J3_7A0S_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94309.4
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 11
Unit IDs
9Q6T|1|1A|G|1344
9Q6T|1|1A|C|1345
9Q6T|1|1A|G|1346
9Q6T|1|1A|G|1347
9Q6T|1|1A|G|1348
9Q6T|1|1A|A|1349
9Q6T|1|1A|C|1350
*
9Q6T|1|1A|G|1381
9Q6T|1|1A|G|1382
9Q6T|1|1A|C|1383
9Q6T|1|1A|A|1384
9Q6T|1|1A|G|1385
*
9Q6T|1|1A|C|1402
9Q6T|1|1A|C|1403
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1X
- 50S ribosomal protein L23
Coloring options: