J3_9Q7Q_032

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CCAG*CCAGUAA*UGAUUAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q7Q|1|K|C|1218
9Q7Q|1|K|C|1219
9Q7Q|1|K|A|1220
9Q7Q|1|K|G|1221
*
9Q7Q|1|K|C|1645
9Q7Q|1|K|C|1646
9Q7Q|1|K|A|1647
9Q7Q|1|K|G|1648
9Q7Q|1|K|U|1649
9Q7Q|1|K|A|1650
9Q7Q|1|K|A|1651
*
9Q7Q|1|K|U|1673
9Q7Q|1|K|G|1674
9Q7Q|1|K|A|1675
9Q7Q|1|K|U|1676
9Q7Q|1|K|U|1677
9Q7Q|1|K|A|1678
9Q7Q|1|K|A|1679
9Q7Q|1|K|G|1680

Current chains

Chain K

18S rRNA

Nearby chains

Chain FF

Ribosomal protein S28

Chain UU

uS9

Chain y

Ribosomal protein S5