J3_9Q7Q_032
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUUAAG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q7Q_032 not in the Motif Atlas
- Homologous match to J3_9H3G_035
- Geometric discrepancy: 0.1355
- The information below is about J3_9H3G_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.4
- Basepair signature
- cWW-F-F-cSS-F-cWW-tWW-F-tWH-F-tHS-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
9Q7Q|1|K|C|1218
9Q7Q|1|K|C|1219
9Q7Q|1|K|A|1220
9Q7Q|1|K|G|1221
*
9Q7Q|1|K|C|1645
9Q7Q|1|K|C|1646
9Q7Q|1|K|A|1647
9Q7Q|1|K|G|1648
9Q7Q|1|K|U|1649
9Q7Q|1|K|A|1650
9Q7Q|1|K|A|1651
*
9Q7Q|1|K|U|1673
9Q7Q|1|K|G|1674
9Q7Q|1|K|A|1675
9Q7Q|1|K|U|1676
9Q7Q|1|K|U|1677
9Q7Q|1|K|A|1678
9Q7Q|1|K|A|1679
9Q7Q|1|K|G|1680
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain FF
- Ribosomal protein S28
- Chain UU
- uS9
- Chain y
- Ribosomal protein S5
Coloring options: