J3_9QEG_015
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9QEG|1|A|A|2545, 9QEG|1|A|U|2546
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9QEG_015 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.0891
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
9QEG|1|A|C|2544
9QEG|1|A|A|2545
9QEG|1|A|U|2546
9QEG|1|A|C|2547
*
9QEG|1|A|G|2572
9QEG|1|A|U|2573
9QEG|1|A|U|2574
*
9QEG|1|A|A|2588
9QEG|1|A|U|2589
9QEG|1|A|U|2590
9QEG|1|A|A|2591
9QEG|1|A|A|2592
9QEG|1|A|A|2593
9QEG|1|A|G|2594
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain I
- Large ribosomal subunit protein uL14
Coloring options: