3D structure

PDB id
9QIW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human pre-60S - State 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
CAGUC*GUGCG*CGACG
Length
15 nucleotides
Bulged bases
9QIW|1|L5|C|704
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QIW|1|L5|C|451
9QIW|1|L5|A|452
9QIW|1|L5|G|453
9QIW|1|L5|U|454
9QIW|1|L5|C|455
*
9QIW|1|L5|G|701
9QIW|1|L5|U|702
9QIW|1|L5|G|703
9QIW|1|L5|C|704
9QIW|1|L5|G|705
*
9QIW|1|L5|C|1292
9QIW|1|L5|G|1293
9QIW|1|L5|A|1294
9QIW|1|L5|C|1295
9QIW|1|L5|G|1296

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LE
Large ribosomal subunit protein eL6
Chain Le
60S ribosomal protein L32
Chain Lf
60S ribosomal protein L35a

Coloring options:

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