J3_9QIW_011

3D structure

PDB id

9QIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human pre-60S - State 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

AAG*CCAUAUC*GU

Length

12 nucleotides

Bulged bases

9QIW|1|L5|U|2788

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QIW|1|L5|A|2403
9QIW|1|L5|A|2404
9QIW|1|L5|G|2405
*
9QIW|1|L5|C|2785
9QIW|1|L5|C|2786
9QIW|1|L5|A|2787
9QIW|1|L5|U|2788
9QIW|1|L5|A|2789
9QIW|1|L5|U|2790
9QIW|1|L5|C|2791
*
9QIW|1|L5|G|2800
9QIW|1|L5|U|2801

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lg

60S ribosomal protein L34

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

60S ribosomal protein L39