J3_9QQB_010
3D structure
- PDB id
- 9QQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- UGGA*UAC*G(G7M)AA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9QQB_010 not in the Motif Atlas
- Geometric match to J3_8CRE_079
- Geometric discrepancy: 0.0811
- The information below is about J3_8CRE_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.4
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9QQB|1|A2|U|1226
9QQB|1|A2|G|1227
9QQB|1|A2|G|1228
9QQB|1|A2|A|1229
*
9QQB|1|A2|U|1531
9QQB|1|A2|A|1532
9QQB|1|A2|C|1533
*
9QQB|1|A2|G|1639
9QQB|1|A2|G7M|1640
9QQB|1|A2|A|1641
9QQB|1|A2|A|1642
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain Ae
- Small ribosomal subunit protein uS7
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain Ar
- Small ribosomal subunit protein uS13
- Chain As
- 40S ribosomal protein S19
- Chain Ay
- Small ribosomal subunit protein eS25
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