J3_9QQB_024

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

9QQB|1|B5|A|1744, 9QQB|1|B5|U|1773

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|U|1665
9QQB|1|B5|U|1666
*
9QQB|1|B5|A|1741
9QQB|1|B5|G|1742
9QQB|1|B5|A|1743
9QQB|1|B5|A|1744
9QQB|1|B5|G|1745
*
9QQB|1|B5|C|1771
9QQB|1|B5|G|1772
9QQB|1|B5|U|1773
9QQB|1|B5|G|1774
9QQB|1|B5|G|1775
9QQB|1|B5|A|1776

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BF

Ribosomal Protein uL30

Chain BT

60S ribosomal protein L21

Chain Bb

60S ribosomal protein L29