J3_9QQL_014

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UCGGUC*GGAGU*AA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|U|2195
9QQL|1|A2|C|2196
9QQL|1|A2|G|2197
9QQL|1|A2|G|2198
9QQL|1|A2|U|2199
9QQL|1|A2|C|2200
*
9QQL|1|A2|G|2270
9QQL|1|A2|G|2271
9QQL|1|A2|A|2272
9QQL|1|A2|G|2273
9QQL|1|A2|U|2274
*
9QQL|1|A2|A|2291
9QQL|1|A2|A|2292

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain R2

Large ribosomal subunit protein uL23

Chain a2

Large ribosomal subunit protein eL34

Chain e2

Large ribosomal subunit protein eL38

Chain f2

Large ribosomal subunit protein eL39