J3_9QQL_018

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

AGAAG*CC*GAAAAU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|A|2353
9QQL|1|A2|G|2354
9QQL|1|A2|A|2355
9QQL|1|A2|A|2356
9QQL|1|A2|G|2357
*
9QQL|1|A2|C|2492
9QQL|1|A2|C|2493
*
9QQL|1|A2|G|2497
9QQL|1|A2|A|2498
9QQL|1|A2|A|2499
9QQL|1|A2|A|2500
9QQL|1|A2|A|2501
9QQL|1|A2|U|2502

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D2

Large ribosomal subunit protein uL2

Chain a2

Large ribosomal subunit protein eL34

Chain j2

Large ribosomal subunit protein eL43