J3_9QQL_019

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CUG*CGGGAGUAACUA(PSU)GACUCUCUUAAGGUAG*UGAA(OMU)G

Length

38 nucleotides

Bulged bases

9QQL|1|A2|U|3428, 9QQL|1|A2|OMU|3474

QA status

Modified nucleotides: PSU, OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|C|3352
9QQL|1|A2|U|3353
9QQL|1|A2|G|3354
*
9QQL|1|A2|C|3408
9QQL|1|A2|G|3409
9QQL|1|A2|G|3410
9QQL|1|A2|G|3411
9QQL|1|A2|A|3412
9QQL|1|A2|G|3413
9QQL|1|A2|U|3414
9QQL|1|A2|A|3415
9QQL|1|A2|A|3416
9QQL|1|A2|C|3417
9QQL|1|A2|U|3418
9QQL|1|A2|A|3419
9QQL|1|A2|PSU|3420
9QQL|1|A2|G|3421
9QQL|1|A2|A|3422
9QQL|1|A2|C|3423
9QQL|1|A2|U|3424
9QQL|1|A2|C|3425
9QQL|1|A2|U|3426
9QQL|1|A2|C|3427
9QQL|1|A2|U|3428
9QQL|1|A2|U|3429
9QQL|1|A2|A|3430
9QQL|1|A2|A|3431
9QQL|1|A2|G|3432
9QQL|1|A2|G|3433
9QQL|1|A2|U|3434
9QQL|1|A2|A|3435
9QQL|1|A2|G|3436
*
9QQL|1|A2|U|3470
9QQL|1|A2|G|3471
9QQL|1|A2|A|3472
9QQL|1|A2|A|3473
9QQL|1|A2|OMU|3474
9QQL|1|A2|G|3475

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Bv

Transfer RNA; tRNA

Chain D2

Large ribosomal subunit protein uL2

Chain h2

60S ribosomal protein L41

Chain m2

Small subunit ribosomal RNA; SSU rRNA