J3_9QQL_022

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

(OMG)UC*GCCUCACGAUCC*(OMG)GUGUC

Length

21 nucleotides

Bulged bases

9QQL|1|A2|C|3989, 9QQL|1|A2|U|4026

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|OMG|3880
9QQL|1|A2|U|3881
9QQL|1|A2|C|3882
*
9QQL|1|A2|G|3983
9QQL|1|A2|C|3984
9QQL|1|A2|C|3985
9QQL|1|A2|U|3986
9QQL|1|A2|C|3987
9QQL|1|A2|A|3988
9QQL|1|A2|C|3989
9QQL|1|A2|G|3990
9QQL|1|A2|A|3991
9QQL|1|A2|U|3992
9QQL|1|A2|C|3993
9QQL|1|A2|C|3994
*
9QQL|1|A2|OMG|4022
9QQL|1|A2|G|4023
9QQL|1|A2|U|4024
9QQL|1|A2|G|4025
9QQL|1|A2|U|4026
9QQL|1|A2|C|4027

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain K2

Large ribosomal subunit protein eL18

Chain N2

Large ribosomal subunit protein eL21

Chain U2

Large ribosomal subunit protein uL15

Chain i2

Large ribosomal subunit protein eL42

Chain n2

Transfer RNA; tRNA