J3_9QQL_025

3D structure

PDB id

9QQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse RPS15 P131 Mutant Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GUUG*CGUUC*GUUGACGCACGUUC

Length

23 nucleotides

Bulged bases

9QQL|1|A2|U|4527, 9QQL|1|A2|G|4584, 9QQL|1|A2|C|4586, 9QQL|1|A2|A|4589, 9QQL|1|A2|C|4590

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQL|1|A2|G|4403
9QQL|1|A2|U|4404
9QQL|1|A2|U|4405
9QQL|1|A2|G|4406
*
9QQL|1|A2|C|4524
9QQL|1|A2|G|4525
9QQL|1|A2|U|4526
9QQL|1|A2|U|4527
9QQL|1|A2|C|4528
*
9QQL|1|A2|G|4581
9QQL|1|A2|U|4582
9QQL|1|A2|U|4583
9QQL|1|A2|G|4584
9QQL|1|A2|A|4585
9QQL|1|A2|C|4586
9QQL|1|A2|G|4587
9QQL|1|A2|C|4588
9QQL|1|A2|A|4589
9QQL|1|A2|C|4590
9QQL|1|A2|G|4591
9QQL|1|A2|U|4592
9QQL|1|A2|U|4593
9QQL|1|A2|C|4594

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain G1

Large ribosomal subunit protein eL14

Chain H2

Large ribosomal subunit protein eL6

Chain I2

Large ribosomal subunit protein uL13

Chain Z2

Large ribosomal subunit protein eL33