J3_9QSA_005
3D structure
- PDB id
- 9QSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-1 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUGAAAAGAAC*GAGUUCAAGAGGGCG*CA
- Length
- 28 nucleotides
- Bulged bases
- 9QSA|1|A2|G|409, 9QSA|1|A2|G|413
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QSA|1|A2|U|380
9QSA|1|A2|U|381
9QSA|1|A2|G|382
9QSA|1|A2|A|383
9QSA|1|A2|A|384
9QSA|1|A2|A|385
9QSA|1|A2|A|386
9QSA|1|A2|G|387
9QSA|1|A2|A|388
9QSA|1|A2|A|389
9QSA|1|A2|C|390
*
9QSA|1|A2|G|401
9QSA|1|A2|A|402
9QSA|1|A2|G|403
9QSA|1|A2|U|404
9QSA|1|A2|U|405
9QSA|1|A2|C|406
9QSA|1|A2|A|407
9QSA|1|A2|A|408
9QSA|1|A2|G|409
9QSA|1|A2|A|410
9QSA|1|A2|G|411
9QSA|1|A2|G|412
9QSA|1|A2|G|413
9QSA|1|A2|C|414
9QSA|1|A2|G|415
*
9QSA|1|C2|C|19
9QSA|1|C2|A|20
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain By
- Nascent protein chain
- Chain F2
- Large ribosomal subunit protein uL4
- Chain J2
- Large ribosomal subunit protein uL22
- Chain S2
- Large ribosomal subunit protein uL24
- Chain f2
- Large ribosomal subunit protein eL39
Coloring options: