J3_9QSA_017

3D structure

PDB id

9QSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-1 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

9QSA|1|A2|G|3726

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QSA|1|A2|C|3593
9QSA|1|A2|G|3594
9QSA|1|A2|G|3595
*
9QSA|1|A2|C|3724
9QSA|1|A2|U|3725
9QSA|1|A2|G|3726
9QSA|1|A2|A|3727
9QSA|1|A2|C|3728
*
9QSA|1|A2|G|3820
9QSA|1|A2|G|3821
9QSA|1|A2|A|3822
9QSA|1|A2|C|3823
9QSA|1|A2|A|3824
9QSA|1|A2|G|3825

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein eL8

Chain D2

Large ribosomal subunit protein uL2

Chain H1

Large ribosomal subunit protein eL15