J3_9QSA_028
3D structure
- PDB id
- 9QSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-1 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- U(OMG)GA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 9QSA|1|m2|G|923
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QSA|1|m2|U|684
9QSA|1|m2|OMG|685
9QSA|1|m2|G|686
9QSA|1|m2|A|687
*
9QSA|1|m2|U|919
9QSA|1|m2|U|920
9QSA|1|m2|A|921
9QSA|1|m2|A|922
9QSA|1|m2|G|923
9QSA|1|m2|A|924
9QSA|1|m2|G|925
*
9QSA|1|m2|C|1021
9QSA|1|m2|A|1022
9QSA|1|m2|U|1023
9QSA|1|m2|U|1024
9QSA|1|m2|A|1025
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain E3
- Small ribosomal subunit protein uS12
- Chain N3
- Small ribosomal subunit protein uS15
- Chain P3
- Small ribosomal subunit protein uS8
- Chain S3
- Small ribosomal subunit protein eS27
- Chain t2
- Small ribosomal subunit protein eS7
- Chain w2
- Small ribosomal subunit protein uS17
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