J3_9R3A_009
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 9R3A|1|A|A|949, 9R3A|1|A|G|950, 9R3A|1|A|A|952
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9R3A_009 not in the Motif Atlas
- Geometric match to J3_8B0X_007
- Geometric discrepancy: 0.0858
- The information below is about J3_8B0X_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9R3A|1|A|U|929
9R3A|1|A|U|930
9R3A|1|A|U|931
9R3A|1|A|A|932
9R3A|1|A|A|933
9R3A|1|A|U|934
9R3A|1|A|U|935
9R3A|1|A|C|936
*
9R3A|1|A|G|947
9R3A|1|A|A|948
9R3A|1|A|A|949
9R3A|1|A|G|950
9R3A|1|A|A|951
9R3A|1|A|A|952
9R3A|1|A|C|953
9R3A|1|A|C|954
9R3A|1|A|U|955
9R3A|1|A|U|956
9R3A|1|A|A|957
9R3A|1|A|C|958
*
9R3A|1|A|G|1195
9R3A|1|A|G|1196
9R3A|1|A|C|1197
9R3A|1|A|U|1198
9R3A|1|A|A|1199
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- Small ribosomal subunit protein uS10
- Chain M
- Small ribosomal subunit protein uS13
- Chain N
- Small ribosomal subunit protein uS14
- Chain S
- Small ribosomal subunit protein uS19
- Chain Y
- Transfer RNA; tRNA
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