J3_9R9O_039
3D structure
- PDB id
- 9R9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CACUGA*UCGUGCUGG*CGAG
- Length
- 19 nucleotides
- Bulged bases
- 9R9O|1|C2|U|1473, 9R9O|1|C2|G|1539
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9R9O|1|C2|C|1470
9R9O|1|C2|A|1471
9R9O|1|C2|C|1472
9R9O|1|C2|U|1473
9R9O|1|C2|G|1474
9R9O|1|C2|A|1475
*
9R9O|1|C2|U|1532
9R9O|1|C2|C|1533
9R9O|1|C2|G|1534
9R9O|1|C2|U|1535
9R9O|1|C2|G|1536
9R9O|1|C2|C|1537
9R9O|1|C2|U|1538
9R9O|1|C2|G|1539
9R9O|1|C2|G|1540
*
9R9O|1|C2|C|1571
9R9O|1|C2|G|1572
9R9O|1|C2|A|1573
9R9O|1|C2|G|1574
Current chains
- Chain C2
- 18S ribosomal RNA
Nearby chains
- Chain SF
- 40S ribosomal protein S5
- Chain SS
- 40S ribosomal protein S18-A
- Chain ST
- 40S ribosomal protein S19-A
- Chain SZ
- 40S ribosomal protein S25-A
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