3D structure

PDB id
9RG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In vitro reconstituted NAA40-NAC bound 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
AUUC*GGACCAGAG*CAUUU
Length
18 nucleotides
Bulged bases
9RG7|1|S2|G|991
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RG7|1|S2|A|938
9RG7|1|S2|U|939
9RG7|1|S2|U|940
9RG7|1|S2|C|941
*
9RG7|1|S2|G|985
9RG7|1|S2|G|986
9RG7|1|S2|A|987
9RG7|1|S2|C|988
9RG7|1|S2|C|989
9RG7|1|S2|A|990
9RG7|1|S2|G|991
9RG7|1|S2|A|992
9RG7|1|S2|G|993
*
9RG7|1|S2|C|1000
9RG7|1|S2|A|1001
9RG7|1|S2|U|1002
9RG7|1|S2|U|1003
9RG7|1|S2|U|1004

Current chains

Chain S2
18S rRNA

Nearby chains

Chain Lp
60S ribosomal protein L37a
Chain SB
40S ribosomal protein S3a
Chain SN
40S ribosomal protein S13
Chain SO
40S ribosomal protein S14
Chain Sa
40S ribosomal protein S26

Coloring options:

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