J3_9RHU_001

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AG*CGC(A2M)AAU*(A2M)GU

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A1|A|40
9RHU|1|A1|G|41
*
9RHU|1|A1|C|482
9RHU|1|A1|G|483
9RHU|1|A1|C|484
9RHU|1|A1|A2M|485
9RHU|1|A1|A|486
9RHU|1|A1|A|487
9RHU|1|A1|U|488
*
9RHU|1|A1|A2M|513
9RHU|1|A1|G|514
9RHU|1|A1|U|515

Current chains

Chain A1

18S rRNA

Nearby chains

Chain U1

Small ribosomal subunit protein uS4

Chain i1

40S ribosomal protein S23

Chain q2

ATP binding cassette subfamily E member 1