J3_9RHU_003
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CAGAUCAAAACCAACCC*GCGGCUUUG*CUAG
- Length
- 30 nucleotides
- Bulged bases
- 9RHU|1|A1|A|226, 9RHU|1|A1|C|238, 9RHU|1|A1|U|287
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|C|223
9RHU|1|A1|A|224
9RHU|1|A1|G|225
9RHU|1|A1|A|226
9RHU|1|A1|U|227
9RHU|1|A1|C|228
9RHU|1|A1|A|229
9RHU|1|A1|A|230
9RHU|1|A1|A|231
9RHU|1|A1|A|232
9RHU|1|A1|C|233
9RHU|1|A1|C|234
9RHU|1|A1|A|235
9RHU|1|A1|A|236
9RHU|1|A1|C|237
9RHU|1|A1|C|238
9RHU|1|A1|C|239
*
9RHU|1|A1|G|281
9RHU|1|A1|C|282
9RHU|1|A1|G|283
9RHU|1|A1|G|284
9RHU|1|A1|C|285
9RHU|1|A1|U|286
9RHU|1|A1|U|287
9RHU|1|A1|U|288
9RHU|1|A1|G|289
*
9RHU|1|A1|C|296
9RHU|1|A1|U|297
9RHU|1|A1|A|298
9RHU|1|A1|G|299
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain P1
- 40S ribosomal protein S4
- Chain R1
- 40S ribosomal protein S6
- Chain T1
- 40S ribosomal protein S8
- Chain W1
- Small ribosomal subunit protein uS17
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