J3_9RHU_004
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- U(OMG)GA*UUAAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 9RHU|1|A1|G|922
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|U|683
9RHU|1|A1|OMG|684
9RHU|1|A1|G|685
9RHU|1|A1|A|686
*
9RHU|1|A1|U|918
9RHU|1|A1|U|919
9RHU|1|A1|A|920
9RHU|1|A1|A|921
9RHU|1|A1|G|922
9RHU|1|A1|A|923
*
9RHU|1|A1|U|1023
9RHU|1|A1|A|1024
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain B1
- Small ribosomal subunit protein eS27
- Chain S1
- Small ribosomal subunit protein eS7
- Chain W1
- Small ribosomal subunit protein uS17
- Chain Y1
- Small ribosomal subunit protein uS15
- Chain h1
- Small ribosomal subunit protein uS8
- Chain i1
- 40S ribosomal protein S23
Coloring options: