J3_9RHU_012
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CCGGAC*GGGUG*UUAGAUG
- Length
- 18 nucleotides
- Bulged bases
- 9RHU|1|A1|G|1275, 9RHU|1|A1|G|1508, 9RHU|1|A1|U|1510
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|C|1273
9RHU|1|A1|C|1274
9RHU|1|A1|G|1275
9RHU|1|A1|G|1276
9RHU|1|A1|A|1277
9RHU|1|A1|C|1278
*
9RHU|1|A1|G|1321
9RHU|1|A1|G|1322
9RHU|1|A1|G|1323
9RHU|1|A1|U|1324
9RHU|1|A1|G|1325
*
9RHU|1|A1|U|1505
9RHU|1|A1|U|1506
9RHU|1|A1|A|1507
9RHU|1|A1|G|1508
9RHU|1|A1|A|1509
9RHU|1|A1|U|1510
9RHU|1|A1|G|1511
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain D1
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain H1
- Small ribosomal subunit protein uS14
- Chain V1
- eS10
- Chain p2
- Eukaryotic peptide chain release factor subunit 1
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