J3_9RHU_016
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CACUG*CGUGAUGG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 9RHU|1|A1|U|1536, 9RHU|1|A1|G|1604
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A1|C|1533
9RHU|1|A1|A|1534
9RHU|1|A1|C|1535
9RHU|1|A1|U|1536
9RHU|1|A1|G|1537
*
9RHU|1|A1|C|1598
9RHU|1|A1|G|1599
9RHU|1|A1|U|1600
9RHU|1|A1|G|1601
9RHU|1|A1|A|1602
9RHU|1|A1|U|1603
9RHU|1|A1|G|1604
9RHU|1|A1|G|1605
*
9RHU|1|A1|C|1636
9RHU|1|A1|G|1637
9RHU|1|A1|A|1638
9RHU|1|A1|G|1639
Current chains
- Chain A1
- 18S rRNA
Nearby chains
- Chain J1
- Transfer RNA; tRNA
- Chain Q1
- Small ribosomal subunit protein uS7
- Chain d1
- Small ribosomal subunit protein uS13
- Chain e1
- 40S ribosomal protein eS19
- Chain k1
- Small ribosomal subunit protein eS25
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