J3_9RHU_025

3D structure

PDB id

9RHU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UU*AGAAG*CGUGGA

Length

13 nucleotides

Bulged bases

9RHU|1|A3|A|1744, 9RHU|1|A3|U|1773

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RHU|1|A3|U|1665
9RHU|1|A3|U|1666
*
9RHU|1|A3|A|1741
9RHU|1|A3|G|1742
9RHU|1|A3|A|1743
9RHU|1|A3|A|1744
9RHU|1|A3|G|1745
*
9RHU|1|A3|C|1771
9RHU|1|A3|G|1772
9RHU|1|A3|U|1773
9RHU|1|A3|G|1774
9RHU|1|A3|G|1775
9RHU|1|A3|A|1776

Current chains

Chain A3

28S rRNA

Nearby chains

Chain B2

60S ribosomal protein L7

Chain P2

60S ribosomal protein L21

Chain X2

60S ribosomal protein L29