J3_9RHU_035
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 9RHU|1|A3|C|3844, 9RHU|1|A3|U|3845, 9RHU|1|A3|U|3846, 9RHU|1|A3|G|3849
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|A3|G|3819
9RHU|1|A3|G|3820
9RHU|1|A3|G|3821
9RHU|1|A3|G|3822
*
9RHU|1|A3|C|3842
9RHU|1|A3|G|3843
9RHU|1|A3|C|3844
9RHU|1|A3|U|3845
9RHU|1|A3|U|3846
9RHU|1|A3|C|3847
9RHU|1|A3|U|3848
9RHU|1|A3|G|3849
9RHU|1|A3|G|3850
9RHU|1|A3|C|3851
9RHU|1|A3|G|3852
9RHU|1|A3|C|3853
9RHU|1|A3|C|3854
9RHU|1|A3|A|3855
9RHU|1|A3|A|3856
9RHU|1|A3|G|3857
*
9RHU|1|A3|C|3901
9RHU|1|A3|G|3902
9RHU|1|A3|A|3903
9RHU|1|A3|C|3904
Current chains
- Chain A3
- 28S rRNA
Nearby chains
- Chain C2
- Large ribosomal subunit protein eL8
- Chain D3
- Large ribosomal subunit protein uL2
- Chain MB
- 60S ribosomal protein L34
- Chain T2
- Large ribosomal subunit protein uL23
- Chain V2
- 60S ribosomal protein L27
- Chain Y2
- 60S ribosomal protein L30
- Chain k2
- 60S ribosomal protein L37a
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