J3_9RPV_012

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGAAGUG*CAA*UCUG

Length

14 nucleotides

Bulged bases

9RPV|1|L5|A|2396, 9RPV|1|L5|U|2398

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|C|2393
9RPV|1|L5|G|2394
9RPV|1|L5|A|2395
9RPV|1|L5|A|2396
9RPV|1|L5|G|2397
9RPV|1|L5|U|2398
9RPV|1|L5|G|2399
*
9RPV|1|L5|C|2805
9RPV|1|L5|A|2806
9RPV|1|L5|A|2807
*
9RPV|1|L5|U|2819
9RPV|1|L5|C|2820
9RPV|1|L5|U|2821
9RPV|1|L5|G|2822

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LR

60S ribosomal protein L19

Chain Lg

60S ribosomal protein L34