J3_9RPV_019

3D structure

PDB id

9RPV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ZAK-bound human disome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

9RPV|1|L5|G|4076

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RPV|1|L5|C|3937
9RPV|1|L5|G|3938
9RPV|1|L5|G|3939
*
9RPV|1|L5|C|4074
9RPV|1|L5|U|4075
9RPV|1|L5|G|4076
9RPV|1|L5|A|4077
9RPV|1|L5|C|4078
*
9RPV|1|L5|G|4168
9RPV|1|L5|G|4169
9RPV|1|L5|A|4170
9RPV|1|L5|C|4171
9RPV|1|L5|A|4172
9RPV|1|L5|G|4173

Current chains

Chain L5

28S rRNA of the collided 80S

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Li

60S ribosomal protein L36