J3_9RTU_002
3D structure
- PDB id
- 9RTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 9RTU|1|A|A|504, 9RTU|1|A|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTU_002 not in the Motif Atlas
- Geometric match to J3_8B0X_032
- Geometric discrepancy: 0.0637
- The information below is about J3_8B0X_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.1
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
9RTU|1|A|G|30
9RTU|1|A|C|31
*
9RTU|1|A|G|474
9RTU|1|A|C|475
9RTU|1|A|G|476
9RTU|1|A|A|477
9RTU|1|A|A|478
9RTU|1|A|A|479
9RTU|1|A|A|480
9RTU|1|A|G|481
9RTU|1|A|A|482
9RTU|1|A|A|483
9RTU|1|A|C|484
*
9RTU|1|A|G|496
9RTU|1|A|A|497
9RTU|1|A|G|498
9RTU|1|A|U|499
9RTU|1|A|G|500
9RTU|1|A|A|501
9RTU|1|A|A|502
9RTU|1|A|A|503
9RTU|1|A|A|504
9RTU|1|A|A|505
9RTU|1|A|G|506
9RTU|1|A|A|507
9RTU|1|A|A|508
9RTU|1|A|C|509
9RTU|1|A|C|510
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein L24
Coloring options: