J3_9RTU_035
3D structure
- PDB id
- 9RTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 9RTU|1|a|U|1240, 9RTU|1|a|C|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTU_035 not in the Motif Atlas
- Geometric match to J3_8B0X_013
- Geometric discrepancy: 0.118
- The information below is about J3_8B0X_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03192.1
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
9RTU|1|a|C|1237
9RTU|1|a|A|1238
9RTU|1|a|A|1239
9RTU|1|a|U|1240
9RTU|1|a|G|1241
*
9RTU|1|a|C|1296
9RTU|1|a|G|1297
9RTU|1|a|U|1298
9RTU|1|a|A|1299
9RTU|1|a|G|1300
9RTU|1|a|U|1301
9RTU|1|a|C|1302
9RTU|1|a|C|1303
*
9RTU|1|a|G|1334
9RTU|1|a|U|1335
9RTU|1|a|C|1336
9RTU|1|a|G|1337
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain m
- 30S ribosomal protein S13
Coloring options: