J3_9RTV_026
3D structure
- PDB id
- 9RTV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- 9RTV|1|a|C|1378
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RTV_026 not in the Motif Atlas
- Homologous match to J3_6CZR_061
- Geometric discrepancy: 0.1444
- The information below is about J3_6CZR_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_25303.3
- Basepair signature
- cWW-tSH-cSS-F-cWW-cSS-tWW-tHH-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9RTV|1|a|C|936
9RTV|1|a|A|937
9RTV|1|a|A|938
9RTV|1|a|G|939
*
9RTV|1|a|C|1344
9RTV|1|a|U|1345
9RTV|1|a|A|1346
9RTV|1|a|G|1347
9RTV|1|a|U|1348
9RTV|1|a|A|1349
9RTV|1|a|A|1350
*
9RTV|1|a|U|1372
9RTV|1|a|G|1373
9RTV|1|a|A|1374
9RTV|1|a|A|1375
9RTV|1|a|U|1376
9RTV|1|a|A|1377
9RTV|1|a|C|1378
9RTV|1|a|G|1379
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
Coloring options: