J3_9RU9_017

3D structure

PDB id

9RU9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

9RU9|1|L5|G|4076

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RU9|1|L5|C|3937
9RU9|1|L5|G|3938
9RU9|1|L5|G|3939
*
9RU9|1|L5|C|4074
9RU9|1|L5|U|4075
9RU9|1|L5|G|4076
9RU9|1|L5|A|4077
9RU9|1|L5|C|4078
*
9RU9|1|L5|G|4168
9RU9|1|L5|G|4169
9RU9|1|L5|A|4170
9RU9|1|L5|C|4171
9RU9|1|L5|A|4172
9RU9|1|L5|G|4173

Current chains

Chain L5

23S rRNA

Nearby chains

Chain LA

Large ribosomal subunit protein uL2

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Li

60S ribosomal protein L36