J3_9RVC_010
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- 9RVC|1|A|U|1002, 9RVC|1|A|U|1225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9RVC_010 not in the Motif Atlas
- Homologous match to J3_6CZR_021
- Geometric discrepancy: 0.351
- The information below is about J3_6CZR_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|A|C|1000
9RVC|1|A|U|1001
9RVC|1|A|U|1002
9RVC|1|A|G|1003
*
9RVC|1|A|C|1057
9RVC|1|A|A|1058
9RVC|1|A|G|1059
*
9RVC|1|A|C|1221
9RVC|1|A|U|1222
9RVC|1|A|U|1223
9RVC|1|A|A|1224
9RVC|1|A|U|1225
9RVC|1|A|G|1226
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- Small ribosomal subunit protein uS14B
Coloring options: