J3_9RVC_011
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACAUCCUUUGACAAC*GCCUUCC*GACAAAGUGAC
- Length
- 34 nucleotides
- Bulged bases
- 9RVC|1|A|C|1033, 9RVC|1|A|U|1035, 9RVC|1|A|C|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|A|G|1003
9RVC|1|A|A|1004
9RVC|1|A|C|1005
9RVC|1|A|A|1006
9RVC|1|A|U|1007
9RVC|1|A|C|1008
9RVC|1|A|C|1009
9RVC|1|A|U|1010
9RVC|1|A|U|1011
9RVC|1|A|U|1012
9RVC|1|A|G|1013
9RVC|1|A|A|1014
9RVC|1|A|C|1015
9RVC|1|A|A|1016
9RVC|1|A|A|1017
9RVC|1|A|C|1018
*
9RVC|1|A|G|1031
9RVC|1|A|C|1032
9RVC|1|A|C|1033
9RVC|1|A|U|1034
9RVC|1|A|U|1035
9RVC|1|A|C|1036
9RVC|1|A|C|1037
*
9RVC|1|A|G|1047
9RVC|1|A|A|1048
9RVC|1|A|C|1049
9RVC|1|A|A|1050
9RVC|1|A|A|1051
9RVC|1|A|A|1052
9RVC|1|A|G|1053
9RVC|1|A|U|1054
9RVC|1|A|G|1055
9RVC|1|A|A|1056
9RVC|1|A|C|1057
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain N
- Small ribosomal subunit protein uS14B
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