J3_9RVC_035
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACUAUAG*CGACGAUGGUAGCC*GCUAGAGUAGAACGUU
- Length
- 37 nucleotides
- Bulged bases
- 9RVC|1|b|U|10, 9RVC|1|b|U|12, 9RVC|1|b|G|105
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|b|A|8
9RVC|1|b|C|9
9RVC|1|b|U|10
9RVC|1|b|A|11
9RVC|1|b|U|12
9RVC|1|b|A|13
9RVC|1|b|G|14
*
9RVC|1|b|C|66
9RVC|1|b|G|67
9RVC|1|b|A|68
9RVC|1|b|C|69
9RVC|1|b|G|70
9RVC|1|b|A|71
9RVC|1|b|U|72
9RVC|1|b|G|73
9RVC|1|b|G|74
9RVC|1|b|U|75
9RVC|1|b|A|76
9RVC|1|b|G|77
9RVC|1|b|C|78
9RVC|1|b|C|79
*
9RVC|1|b|G|92
9RVC|1|b|C|93
9RVC|1|b|U|94
9RVC|1|b|A|95
9RVC|1|b|G|96
9RVC|1|b|A|97
9RVC|1|b|G|98
9RVC|1|b|U|99
9RVC|1|b|A|100
9RVC|1|b|G|101
9RVC|1|b|A|102
9RVC|1|b|A|103
9RVC|1|b|C|104
9RVC|1|b|G|105
9RVC|1|b|U|106
9RVC|1|b|U|107
Current chains
- Chain b
- 5S
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- Large ribosomal subunit protein uL16
- Chain n
- Large ribosomal subunit protein uL18
- Chain u
- Large ribosomal subunit protein bL25
- Chain v
- Large ribosomal subunit protein bL27
- Chain y
- Large ribosomal subunit protein uL30
Coloring options: