J3_9S3B_004

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UUGAAAAG*CG*CA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|U|380
9S3B|1|L5|U|381
9S3B|1|L5|G|382
9S3B|1|L5|A|383
9S3B|1|L5|A|384
9S3B|1|L5|A|385
9S3B|1|L5|A|386
9S3B|1|L5|G|387
*
9S3B|1|L5|C|414
9S3B|1|L5|G|415
*
9S3B|1|L8|C|19
9S3B|1|L8|A|20

Current chains

Chain L5

28S rRNA

Chain L8

5.8S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26

Chain Ll

60S ribosomal protein L39