J3_9S3B_016

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|A|2551
9S3B|1|L5|G|2552
9S3B|1|L5|A|2553
9S3B|1|L5|U|2554
9S3B|1|L5|G|2555
*
9S3B|1|L5|C|2572
9S3B|1|L5|A|2573
9S3B|1|L5|G|2574
9S3B|1|L5|U|2575
*
9S3B|1|L5|A|2757
9S3B|1|L5|G|2758
9S3B|1|L5|G|2759
9S3B|1|L5|G|2760
9S3B|1|L5|U|2761
9S3B|1|L5|G|2762
9S3B|1|L5|U|2763
9S3B|1|L5|A|2764
9S3B|1|L5|A|2765
9S3B|1|L5|A|2766
9S3B|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27