3D structure

PDB id
9S3C (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
AUUC*GGACCAGAG*CAUUU
Length
18 nucleotides
Bulged bases
9S3C|1|S2|G|991
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3C|1|S2|A|938
9S3C|1|S2|U|939
9S3C|1|S2|U|940
9S3C|1|S2|C|941
*
9S3C|1|S2|G|985
9S3C|1|S2|G|986
9S3C|1|S2|A|987
9S3C|1|S2|C|988
9S3C|1|S2|C|989
9S3C|1|S2|A|990
9S3C|1|S2|G|991
9S3C|1|S2|A|992
9S3C|1|S2|G|993
*
9S3C|1|S2|C|1000
9S3C|1|S2|A|1001
9S3C|1|S2|U|1002
9S3C|1|S2|U|1003
9S3C|1|S2|U|1004

Current chains

Chain S2
18S rRNA

Nearby chains

Chain Lp
60S ribosomal protein L37a
Chain SB
40S ribosomal protein S3a
Chain SN
40S ribosomal protein S13
Chain SO
40S ribosomal protein S14
Chain Sa
40S ribosomal protein S26

Coloring options:

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