J3_9S3D_032

3D structure

PDB id

9S3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

NAC bound human RNC with 58 amino acid ARF1-linker

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

9S3D|1|S2|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3D|1|S2|A|938
9S3D|1|S2|U|939
9S3D|1|S2|U|940
9S3D|1|S2|C|941
*
9S3D|1|S2|G|985
9S3D|1|S2|G|986
9S3D|1|S2|A|987
9S3D|1|S2|C|988
9S3D|1|S2|C|989
9S3D|1|S2|A|990
9S3D|1|S2|G|991
9S3D|1|S2|A|992
9S3D|1|S2|G|993
*
9S3D|1|S2|C|1000
9S3D|1|S2|A|1001
9S3D|1|S2|U|1002
9S3D|1|S2|U|1003
9S3D|1|S2|U|1004

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Lp

60S ribosomal protein L37a

Chain SB

40S ribosomal protein S3a

Chain SN

40S ribosomal protein S13

Chain SO

40S ribosomal protein S14

Chain Sa

40S ribosomal protein S26