J3_9SUM_006

3D structure

PDB id

9SUM (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

AGACAC*GGG*CGCAAU

Length

15 nucleotides

Bulged bases

9SUM|1|A|C|429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SUM|1|A|A|426
9SUM|1|A|G|427
9SUM|1|A|A|428
9SUM|1|A|C|429
9SUM|1|A|A|430
9SUM|1|A|C|431
*
9SUM|1|A|G|442
9SUM|1|A|G|443
9SUM|1|A|G|444
*
9SUM|1|A|C|564
9SUM|1|A|G|565
9SUM|1|A|C|566
9SUM|1|A|A|567
9SUM|1|A|A|568
9SUM|1|A|U|569

Current chains

Chain A

25S rRNA

Nearby chains

Chain R

60S ribosomal protein L17-B

Chain g

60S ribosomal protein L32

Chain h

60S ribosomal protein L33-A