J3_9SUM_008
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|A|760, 9SUM|1|A|G|867, 9SUM|1|A|A|868
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.4
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 12
Unit IDs
9SUM|1|A|U|757
9SUM|1|A|G|758
9SUM|1|A|A|759
9SUM|1|A|A|760
9SUM|1|A|C|761
9SUM|1|A|U|762
9SUM|1|A|A|763
*
9SUM|1|A|U|848
9SUM|1|A|A|849
9SUM|1|A|G|850
*
9SUM|1|A|C|866
9SUM|1|A|G|867
9SUM|1|A|A|868
9SUM|1|A|A|869
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L2-A
- Chain P
- Ribosomal protein L15
- Chain l
- Ribosomal protein L37
- Chain n
- Large ribosomal subunit protein eL39
Coloring options: