J3_9SUM_009
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAG*CGUAG*UCGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69816.4
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 12
Unit IDs
9SUM|1|A|U|772
9SUM|1|A|A|773
9SUM|1|A|G|774
*
9SUM|1|A|C|806
9SUM|1|A|G|807
9SUM|1|A|U|808
9SUM|1|A|A|809
9SUM|1|A|G|810
*
9SUM|1|A|U|835
9SUM|1|A|C|836
9SUM|1|A|G|837
9SUM|1|A|A|838
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L2-A
- Chain T
- Ribosomal protein L19
- Chain i
- 60S ribosomal protein L34-B
- Chain r
- 60S ribosomal protein L43
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