J3_9SUM_015
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- CUCAG*UGAUGAAAGUCG*CCUCUG
- Length
- 23 nucleotides
- Bulged bases
- 9SUM|1|A|A|1500, 9SUM|1|A|U|1503, 9SUM|1|A|C|1504
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SUM|1|A|C|1481
9SUM|1|A|U|1482
9SUM|1|A|C|1483
9SUM|1|A|A|1484
9SUM|1|A|G|1485
*
9SUM|1|A|U|1494
9SUM|1|A|G|1495
9SUM|1|A|A|1496
9SUM|1|A|U|1497
9SUM|1|A|G|1498
9SUM|1|A|A|1499
9SUM|1|A|A|1500
9SUM|1|A|A|1501
9SUM|1|A|G|1502
9SUM|1|A|U|1503
9SUM|1|A|C|1504
9SUM|1|A|G|1505
*
9SUM|1|A|C|1520
9SUM|1|A|C|1521
9SUM|1|A|U|1522
9SUM|1|A|C|1523
9SUM|1|A|U|1524
9SUM|1|A|G|1525
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- 60S ribosomal protein L2-A
- Chain J
- 60S ribosomal protein L8
- Chain P
- Ribosomal protein L15
- Chain Z
- Large ribosomal subunit protein uL23
- Chain l
- Ribosomal protein L37
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