J3_9SUM_019
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GUC*GCCUAUCGAUCC*GGUGCC
- Length
- 21 nucleotides
- Bulged bases
- 9SUM|1|A|C|2660, 9SUM|1|A|C|2697
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04772.4
- Basepair signature
- cWW-F-tHH-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9SUM|1|A|G|2551
9SUM|1|A|U|2552
9SUM|1|A|C|2553
*
9SUM|1|A|G|2654
9SUM|1|A|C|2655
9SUM|1|A|C|2656
9SUM|1|A|U|2657
9SUM|1|A|A|2658
9SUM|1|A|U|2659
9SUM|1|A|C|2660
9SUM|1|A|G|2661
9SUM|1|A|A|2662
9SUM|1|A|U|2663
9SUM|1|A|C|2664
9SUM|1|A|C|2665
*
9SUM|1|A|G|2693
9SUM|1|A|G|2694
9SUM|1|A|U|2695
9SUM|1|A|G|2696
9SUM|1|A|C|2697
9SUM|1|A|C|2698
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain S
- 60S ribosomal protein L18-A
- Chain V
- 60S ribosomal protein L21-A
- Chain c
- 60S ribosomal protein L28
- Chain q
- 60S ribosomal protein L44
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