J3_9SUM_021
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAUC*GUU*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 9SUM|1|A|A|2787, 9SUM|1|A|U|2788
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44047.4
- Basepair signature
- cWW-cWH-cWW-cSS-tWW-tSS-F-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
9SUM|1|A|U|2786
9SUM|1|A|A|2787
9SUM|1|A|U|2788
9SUM|1|A|C|2789
*
9SUM|1|A|G|2814
9SUM|1|A|U|2815
9SUM|1|A|U|2816
*
9SUM|1|A|A|2830
9SUM|1|A|C|2831
9SUM|1|A|U|2832
9SUM|1|A|A|2833
9SUM|1|A|A|2834
9SUM|1|A|U|2835
9SUM|1|A|A|2836
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL3
- Chain Q
- 60S ribosomal protein L16-B
- Chain X
- 60S ribosomal protein L23-B
Coloring options: