J3_9SUM_022
3D structure
- PDB id
- 9SUM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of Candida auris 80S ribosome in complex with Cycloheximide and Geneticin G418
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- UAGUUG*CAUACAAGG*CGAAUUGCAAUGUCA
- Length
- 30 nucleotides
- Bulged bases
- 9SUM|1|A|A|3075, 9SUM|1|A|G|3076, 9SUM|1|A|A|3109, 9SUM|1|A|C|3110, 9SUM|1|A|G|3113, 9SUM|1|A|A|3157, 9SUM|1|A|U|3159, 9SUM|1|A|C|3161
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SUM|1|A|U|3074
9SUM|1|A|A|3075
9SUM|1|A|G|3076
9SUM|1|A|U|3077
9SUM|1|A|U|3078
9SUM|1|A|G|3079
*
9SUM|1|A|C|3106
9SUM|1|A|A|3107
9SUM|1|A|U|3108
9SUM|1|A|A|3109
9SUM|1|A|C|3110
9SUM|1|A|A|3111
9SUM|1|A|A|3112
9SUM|1|A|G|3113
9SUM|1|A|G|3114
*
9SUM|1|A|C|3154
9SUM|1|A|G|3155
9SUM|1|A|A|3156
9SUM|1|A|A|3157
9SUM|1|A|U|3158
9SUM|1|A|U|3159
9SUM|1|A|G|3160
9SUM|1|A|C|3161
9SUM|1|A|A|3162
9SUM|1|A|A|3163
9SUM|1|A|U|3164
9SUM|1|A|G|3165
9SUM|1|A|U|3166
9SUM|1|A|C|3167
9SUM|1|A|A|3168
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain H
- 60S ribosomal protein L6
- Chain O
- Large ribosomal subunit protein eL14 domain-containing protein
- Chain Q
- 60S ribosomal protein L16-B
- Chain R
- 60S ribosomal protein L17-B
- Chain h
- 60S ribosomal protein L33-A
Coloring options: